Skills & Other Roles

Skills


`very competent`	`R` `R shiny` `R markdown` `Python` `bash` `HPC` `slurm` `Nextflow` `docker` `Singularity` `single-cell` `RNA-seq` `ATAC-seq` `data visualization` `ggplot2` `tidyverse`


`somewhat competent`	`cloud computing` `GWAS` `variant annotation` `html` `css` `quarto`


`would like to improve`	`spatial transcriptomics` `machine learning` `javascript`

One of two student representatives for my PhD cohort, which involved planning events and liaising with the program managers if any students had issues (2019-2023).
I was also a student representative on the Executive Management Committee for my PhD program, which involved going to regular management meetings and contributing a student’s perspective to any decisions being made (2019-2022).
In May 2022 I founded a monthly Single-Cell Journal Club for single-cell researchers in Ireland.
In December 2020, I was a member of the organizing committee for a successful student-run virtual symposium on Computational Genomics and Systems Biology.
I designed and delivered a short online data visualization workshop as part of a Data Science for Life Scientists course during the pandemic. You can find it here.
I have plenty of experience teaching and have been giving tutorials and delivering workshops in genomics data science and single-cell transcriptomics to MSc and PhD students since 2019.